Biopanning and rapid analysis of selective interactive ligands

RJ Giordano, M Cardó-Vila, J Lahdenranta… - 2001 - nature.com
RJ Giordano, M Cardó-Vila, J Lahdenranta, R Pasqualini, W Arap
2001nature.com
Here we introduce a new approach for the screening, selection and sorting of cell-surface–
binding peptides from phage libraries. Biopanning and rapid analysis of selective interactive
ligands (termed BRASIL) is based on differential centrifugation in which a cell suspension
incubated with phage in an aqueous upper phase is centrifuged through a non-miscible
organic lower phase. This single-step organic phase separation is faster, more sensitive and
more specific than current methods that rely on washing steps or limiting dilution. As a proof …
Abstract
Here we introduce a new approach for the screening, selection and sorting of cell-surface–binding peptides from phage libraries. Biopanning and rapid analysis of selective interactive ligands (termed BRASIL) is based on differential centrifugation in which a cell suspension incubated with phage in an aqueous upper phase is centrifuged through a non-miscible organic lower phase. This single-step organic phase separation is faster, more sensitive and more specific than current methods that rely on washing steps or limiting dilution. As a proof-of-principle, we screened human endothelial cells stimulated with vascular endothelial growth factor (VEGF) and constructed a peptide-based ligand-receptor map of the VEGF family. Next, we validated the motif PQPRPL as a novel chimeric ligand mimic that binds specifically to VEGF receptor-1 and to neuropilin-1. BRASIL may prove itself a superior method for probing target cell surfaces with a broad range of potential applications.
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